Bakhtiarizadeh, M.R., Salehi, A., Alamouti, A.A., Abdollahi-Arpanahi, R., Salami, S.A., 2019. Deep transcriptome analysis using RNA-Seq suggests novel insights into molecular aspects of fat-tail metabolism in sheep. Sci. Rep. 9, 9203.
|
Barth, N., Langmann, T., Schölmerich, J., Schmitz, G., Schäffler, A., 2002. Identification of regulatory elements in the human adipose most abundant gene transcript-1 (apM-1) promoter:Role of SP1/SP3 and TNF-α as regulatory pathways. Diabetologia 45, 1425-1433.
|
Bergsten, E., Uutela, M., Li, X., Pietras, K., Östman, A., Heldin, C.-H., Alitalo, K., Eriksson, U., 2001.PDGF-D is a specific, protease-activated ligand for the PDGF β-receptor. Nat. Cell Biol. 3, 512- 516.
|
Bouchard, L., Bouchard, C., Chagnon, Y.C., Perusse, L., 2007. Evidence of linkage and association with body fatness and abdominal fat on chromosome 15q26. Obesity 15, 2061-2070.
|
Chessa, B., Pereira, F., Arnaud, F., Amorim, A., Goyache, F., Mainland, I., Kao, R.R., Pemberton, J.M., Beraldi, D., Stear, M.J., et al., 2009. Revealing the history of sheep domestication using retrovirus integrations. Science. 324, 532-536.
|
Dong, K., Yang, M., Han, Jiangang, Ma, Q., Han, Jilong, Song, Z., Luosang, C., Gorkhali, N.A., Yang, B., He, X., et al., 2020. Genomic analysis of worldwide sheep breeds reveals PDGFD as a major target of fat-tail selection in sheep. BMC Genomics 21, 800.
|
Han, J., Ma, S., Liang, B., Bai, T., Zhao, Y., Ma, Y., MacHugh, D.E., Ma, L., Jiang, L., 2022.Transcriptome profiling of developing ovine fat tail tissue reveals an important role for MTFP1 in regulation of adipogenesis. Front. Cell Dev. Biol. 10, 839731.
|
Jang, H.-K., Bae, S., 2020. i-Silence, Please! An alternative for gene disruption via adenine base editors.Mol. Ther. 28, 348-349.
|
Jeong, Y.K., Song, B., Bae, S., 2020. Current status and challenges of DNA base editing tools. Mol. Ther. 28, 1938-1952.
|
Kalds, P., Huang, S., Chen, Y., Wang, X., 2022. Ovine HOXB13:Expanding the gene repertoire of sheep tail patterning and implications in genetic improvement. Commun. Biol. 5, 1196.
|
Li, B., Qiao, L., An, L., Wang, W., Liu, J., Ren, Y., Pan, Y., Jing, J., Liu, W., 2018. Transcriptome analysis of adipose tissues from two fat-tailed sheep breeds reveals key genes involved in fat deposition. BMC Genomics 19, 338.
|
Li, X., Yang, J., Shen, M., Xie, X.-L., Liu, G.-J., Xu, Y.-X., Lv, F.-H., Yang, H., Yang, Y.-L., Liu, C.-B., et al., 2020. Whole-genome resequencing of wild and domestic sheep identifies genes associated with morphological and agronomic traits. Nat. Commun. 11, 2815.
|
Pan, Z., Li, S., Liu, Q., Wang, Z., Zhou, Z., Di, R., An, X., Miao, B., Wang, X., Hu, W., et al., 2019.
|
Rapid evolution of a retro-transposable hotspot of ovine genome underlies the alteration of BMP2 expression and development of fat tails. BMC Genomics 20, 261.
|
Shungin, D., Winkler, T., Croteau-Chonka, D.C., Ferreira, T., Locke, A.E., Mägi, R., Strawbridge, R.J., Pers, T.H., Fischer, K., Justice, A.E., et al., 2015. New genetic loci link adipose and insulin biology to body fat distribution. Nature 518, 187-196.
|
Ullah, M., Stich, S., Häupl, T., Eucker, J., Sittinger, M., Ringe, J., 2013. Reverse differentiation as a gene filtering tool in genome expression profiling of adipogenesis for fat marker gene selection and their analysis. PLoS One 8, e69754.
|
Wang, Z., Ahmad, A., Li, Y., Kong, D., Azmi, A.S., Banerjee, S., Sarkar, F.H., 2010. Emerging roles of PDGF-D signaling pathway in tumor development and progression. Biochim. Biophys. Acta-Rev.Cancer 1806, 122-130.
|
Wei, C., Wang, H., Liu, G., Wu, M., Cao, J., Liu, Z., Liu, R., Zhao, F., Zhang, L., Lu, J., Liu, C., Du, L., 2015. Genome-wide analysis reveals population structure and selection in Chinese indigenous sheep breeds. BMC Genomics 16, 194.
|
Yuan, Z., Liu, E., Liu, Z., Kijas, J.W., Zhu, C., Hu, S., Ma, X., Zhang, L., Du, L., Wang, H., Wei, C., 2017. Selection signature analysis reveals genes associated with tail type in Chinese indigenous sheep. Anim. Genet. 48, 55-66.
|
Zhang, W., Xu, M., Wang, J., Wang, S., Wang, X., Yang, J., Gao, L., Gan, S., 2021. Comparative transcriptome analysis of key genes and pathways activated in response to fat deposition in two sheep breeds with distinct tail phenotype. Front. Genet. 12, 639030.
|
Zhao, F., Deng, T., Shi, L., Wang, W., Zhang, Q., Du, L., Wang, L., 2020. Genomic scan for selection signature reveals fat deposition in Chinese indigenous sheep with extreme tail types. Anim. 10, 773.
|
[1] | Shuang Wu, Yiwei Zhang, Lan Yao, Jiaqiang Wang, Falong Lu, Yusheng Liu. m6A-modified RNAs possess distinct poly(A) tails[J]. Journal of Genetics and Genomics, 2023, 50(3): 208-211. doi: 10.1016/j.jgg.2022.10.001 |
[2] | Chen Wei, Xiaodian Cai, Shuqi Diao, Jinyan Teng, Zhiting Xu, Wenjing Zhang, Haonan Zeng, Zhanming Zhong, Xibo Wu, Yahui Gao, Jiaqi Li, Zhe Zhang. Integrating genome-wide association study with a multi-tissue transcriptome analysis provides insights into the genetic architecture of teat traits in pigs[J]. Journal of Genetics and Genomics. doi: 10.1016/j.jgg.2023.07.003 |
[3] | Hao Li, Fang Nie, Lele Zhu, Menghua Mu, Ruixiao Fan, Jingyao Li, Aaqib Shaheen, Yifan Liu, Can Li, Wenjuan Liu, Huihui Liang, Xinpeng Zhao, Shenglong Bai, Guanghui Guo, Zheng Li, Yiheng Hu, Yuannian Jiao, Jonathan Adams, Assaf Distelfeld, Guiling Sun, Suoping Li, Yun Zhou, Chun-Peng Song. New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China[J]. Journal of Genetics and Genomics, 2022, 49(3): 185-194. doi: 10.1016/j.jgg.2021.11.004 |
[4] | Fei Wang, Junjie Shao, Sangang He, Yingwei Guo, Xiangyu Pan, Yu Wang, Hojjat Asadollahpour Nanaei, Lei Chen, Ran Li, Han Xu, Zhirui Yang, Mingjun Liu, Yu Jiang. Allele-specific expression and splicing provide insight into the phenotypic differences between thin- and fat-tailed sheep breeds[J]. Journal of Genetics and Genomics, 2022, 49(6): 583-586. doi: 10.1016/j.jgg.2021.12.008 |
[5] | Yubing Liu, Xinmei Lu, Min Ye, Ling Wang, Rongxin Tang, Zhiyong Yang, Bongkoch Turathum, Chenchen Liu, Yujing Xue, Menghua Wu, Yannan Yang, Ermeng Gao, Di Zhang, Feng Yang, Keh-Kooi Kee, Xingxu Huang, Guanglei Li, Ri-Cheng Chian. Efficient silencing of the multicopy DUX4 gene by ABE-mediated start codon mutation in human embryos[J]. Journal of Genetics and Genomics, 2022, 49(10): 982-985. doi: 10.1016/j.jgg.2022.02.010 |
[6] | Micah Silberstein, Nicholas Nesbit, Jacquelyn Cai, Phil H. Lee. Pathway analysis for genome-wide genetic variation data: Analytic principles, latest developments, and new opportunities[J]. Journal of Genetics and Genomics, 2021, 48(3): 173-183. doi: 10.1016/j.jgg.2021.01.007 |
[7] | Weihua Shou, Chenhui Zhang, Jinxiu Shi, Hong Wu, Wei Huang. Fine genetic mapping of the chromosome 11q23.3 region in a Han Chinese population: insights into the apolipoprotein genes underlying the blood lipid-lipoprotein variances[J]. Journal of Genetics and Genomics, 2020, 47(12): 756-769. doi: 10.1016/j.jgg.2020.11.010 |
[8] | Yi-Chun Huang, Henry Moreno, Sarayu Row, Dongyu Jia, Wu-Min Deng. Germline silencing of UASt depends on the piRNA pathway[J]. Journal of Genetics and Genomics, 2018, 45(5): 273-276. doi: 10.1016/j.jgg.2018.04.005 |
[9] | Falong Lu. The start of a human life program[J]. Journal of Genetics and Genomics, 2018, 45(4): 183-184. doi: 10.1016/j.jgg.2018.04.001 |
[10] | Eei Yin Lui, Caixia Li, Zhi-Hua Li, Zhiyuan Gong, Siew Hong Lam. Molecular insights of organochlorine biocide-induced toxicity in zebrafish: Whole-adult-organism toxicogenomics, targeted gene expression and histological analyses[J]. Journal of Genetics and Genomics, 2016, 43(8): 525-528. doi: 10.1016/j.jgg.2016.06.001 |
[11] | María Cerezo, Leonor Gusmão, Viktor Černý, Nabeel Uddin, Denise Syndercombe-Court, Alberto Gómez-Carballa, Tanja Göbel, Peter M. Schneider, Antonio Salas. Comprehensive Analysis of Pan-African Mitochondrial DNA Variation Provides New Insights into Continental Variation and Demography[J]. Journal of Genetics and Genomics, 2016, 43(3): 133-143. doi: 10.1016/j.jgg.2015.09.005 |
[12] | Xiangdong Fu. New insights into plant nutrient signaling and adaptation to fluctuating environments[J]. Journal of Genetics and Genomics, 2016, 43(11): 621-622. doi: 10.1016/j.jgg.2016.11.004 |
[13] | Qiong Zhao, Caiji Gao, PoShing Lee, Lin Liu, Shaofang Li, Tangjin Hu, Jinbo Shen, Shuying Pan, Hao Ye, Yunru Chen, Wenhan Cao, Yong Cui, Peng Zeng, Sheng Yu, Yangbin Gao, Liang Chen, Beixin Mo, Xin Liu, Shi Xiao, Yunde Zhao, Silin Zhong, Xuemei Chen, Liwen Jiang. Fast-Suppressor Screening for New Components in Protein Trafficking, Organelle Biogenesis and Silencing Pathway in Arabidopsis thaliana Using DEX-Inducible FREE1-RNAi Plants[J]. Journal of Genetics and Genomics, 2015, 42(6): 319-330. doi: 10.1016/j.jgg.2015.03.012 |
[14] | Zhenglong Liu, Xia Li, Qinlan Ge, Mei Ding, Xun Huang. A Lipid Droplet-Associated GFP Reporter-Based Screen Identifies New Fat Storage Regulators in C. elegans[J]. Journal of Genetics and Genomics, 2014, 41(5): 305-313. doi: 10.1016/j.jgg.2014.03.002 |
[15] | Hongwei Li, Yiping Tong, Bin Li, Ruilian Jing, Congming Lu, Zhensheng Li. Genetic analysis of tolerance to photo-oxidative stress induced by high light in winter wheat (Triticum aestivum L.)[J]. Journal of Genetics and Genomics, 2010, 37(6): 399-412. doi: 10.1016/S1673-8527(09)60058-8 |
[16] | Lan Kang, Zhaohui Kou, Yu Zhang, Shaorong Gao. Induced pluripotent stem cells (iPSCs)—a new era of reprogramming[J]. Journal of Genetics and Genomics, 2010, 37(7): 415-421. doi: 10.1016/S1673-8527(09)60060-6 |
[17] | Anjana Munshi, Shanti Duvvuri. Genomic Imprinting—The Story of the Other Half and the Conflicts of Silencing[J]. Journal of Genetics and Genomics, 2007, 34(2): 93-103. doi: 10.1016/S1673-8527(07)60010-1 |
[18] | Meng Zhou, Chunfa Tong, Jisen Shi. Analysis of Codon Usage Between Different Poplar Species[J]. Journal of Genetics and Genomics, 2007, 34(6): 555-561. doi: 10.1016/S1673-8527(07)60061-7 |
[19] | Wei Sun, Hong Chang, Dejun Ji, Xinjun Liao, Lei Du, Shengxia Lu, Tsunoda Kenji. Analysis on Genetic Diversity and Isolation Mechanism by Distance of Different Ecological Type Sheep Breeds in Mongolia Sheep Group[J]. Journal of Genetics and Genomics, 2007, 34(11): 1001-1009. doi: 10.1016/S1673-8527(07)60113-1 |
[20] | Yong Qiao, Zhiguo Huang, Qifa Li, Zhenshan Liu, Chengli Hao, Guoqing Shi, Rong Dai, Zhuang Xie. Developmental Changes of the FAS and HSL mRNA Expression and Their Effects on the Content of Intramuscular Fat in Kazak and Xinjiang Sheep[J]. Journal of Genetics and Genomics, 2007, 34(10): 909-917. doi: 10.1016/S1673-8527(07)60102-7 |