5.9
CiteScore
5.9
Impact Factor
Volume 49 Issue 10
Oct.  2022
Turn off MathJax
Article Contents

Efficient silencing of the multicopy DUX4 gene by ABE-mediated start codon mutation in human embryos

doi: 10.1016/j.jgg.2022.02.010
Funds:

D Program of China (2017YFC1002003), and the project sponsored by the National Natural Science Foundation of China (31601197).

This work was supported by the National Key R&

  • Received Date: 2021-09-08
  • Accepted Date: 2022-02-17
  • Rev Recd Date: 2022-01-26
  • Publish Date: 2022-02-26
  • loading
  • Adikusuma, F., Williams, N., Grutzner, F., Hughes, J. & Thomas, P., 2017. Targeted deletion of an entire chromosome using CRISPR/Cas9. Mol. Ther. 25, 1736-1738
    Chen, Z. & Zhang, Y., 2019. Loss of DUX causes minor defects in zygotic genome activation and is compatible with mouse development. Nat. Genet. 51, 947-951
    De Iaco, A., Planet, E., Coluccio, A., Verp, S., Duc J & Trono, D., 2017. DUX-family transcription factors regulate zygotic genome activation in placental mammals. Nat. Genet. 49, 941-945
    Gaudelli, N. M., Komor, A. C., Rees, H. A., Packer, M. S., Badran, A. H., Bryson, D. I. & Liu, D. R., 2017. Programmable base editing of A*T to G*C in genomic DNA without DNA cleavage. Nature. 551, 464-471
    Guo, M., Zhang, Y., Zhou, J., Bi, Y., Xu, J., Xu, C., Kou, X., Zhao, Y., Li, Y. & Tu, Z., et al., 2019. Precise temporal regulation of Dux is important for embryo development. Cell Res. 29, 956-959
    Hosseini, E., Mehraein, F., Shahhoseini, M., Karimian, L., Nikmard, F., Ashrafi, M., Afsharian, P. & Aflatoonian, R., 2016. Epigenetic alterations of CYP19A1 gene in Cumulus cells and its relevance to infertility in endometriosis. J. Assist. Reprod. Genet. 33, 1105-1113
    Jin, S., Zong, Y., Gao, Q., Zhu, Z., Wang, Y., Qin, P., Liang, C., Wang, D., Qiu, J. L. & Zhang, F., et al., 2019. Cytosine, but not adenine, base editors induce genome-wide off-target mutations in rice. Science. 364, 292-295
    Komor, A. C., Kim, Y. B., Packer, M. S., Zuris, J. A. & Liu, D. R., 2016. Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage. Nature. 533, 420-424
    Kuscu, C., Parlak, M., Tufan, T., Yang, J., Szlachta, K., Wei, X., Mammadov, R. & Adli, M., 2017. CRISPR-STOP:gene silencing through base-editing-induced nonsense mutations. Nat. Methods. 14, 710-712
    A, L. R. & K, N. K., 2019. Human germline genome editing. Nat. Cell Biol. 21, 1479-1489
    Ledford, H., 2020. CRISPR gene editing in human embryos wreaks chromosomal mayhem. Nature. 583, 17-18
    Hendrickson, Peter G., et al., 2017. Conserved roles of mouse DUX and human DUX4 in activating cleavage-stage genes and MERVL/HERVL retrotransposons. Nat. Genet. 49, 925-934
    Rickels, R., Herz, H. M., Sze, C. C., Cao, K., Morgan, M. A., Collings, C. K., Gause, M., Takahashi, Y. H., Wang, L. & Rendleman, E. J., et al., 2017. Histone H3K4 monomethylation catalyzed by Trr and mammalian COMPASS-like proteins at enhancers is dispensable for development and viability. Nat. Genet. 49, 1647-1653
    Sha, Q. Q., Zhang, J. & Fan, H. Y., 2019. A story of birth and death:mRNA translation and clearance at the onset of maternal-to-zygotic transition in mammalsdagger. Biol. Reprod. 101, 579-590
    Sha, Q. Q., Zhu, Y. Z., Li, S., Jiang, Y., Chen, L., Sun, X. H., Shen, L., Ou, X. H. & Fan, H. Y., 2020. Characterization of zygotic genome activation-dependent maternal mRNA clearance in mouse. Nucleic Acids Res. 48, 879-894
    Skeparnias, I., Alphanastasakis, D., Shaukat, A. N., Grafanaki, K. & Stathopoulos, C., 2017. Expanding the repertoire of deadenylases. RNA Biol. 14, 1320-1325
    Snider, L., Asawachaicharn, A., Tyler, A. E., Geng, L. N., Petek, L. M., Maves, L., Miller, D. G., Lemmers, R. J., Winokur, S. T. & Tawil, R., et al., 2009. RNA transcripts, miRNA-sized fragments and proteins produced from D4Z4 units:new candidates for the pathophysiology of facioscapulohumeral dystrophy. Hum. Mol. Genet. 18, 2414-2430
    Snider, L., Geng, L. N., Lemmers, R. J., Kyba, M., Ware, C. B., Nelson, A. M., Tawil, R., Filippova, G. N., van der Maarel, S. M. & Tapscott, S. J., et al., 2010. Facioscapulohumeral dystrophy:incomplete suppression of a retrotransposed gene. PLoS Genet. 6, e1001181
    Vassena, R., Boue, S., Gonzalez-Roca, E., Aran, B., Auer, H., Veiga, A. & Izpisua, B. J., 2011. Waves of early transcriptional activation and pluripotency program initiation during human preimplantation development. Development. 138, 3699-3709
    Wang, X., Liu, Z., Li, G., Dang, L., Huang, S., He, L., Ma, Y., Li, C., Liu, M. & Yang, G., et al., 2020. Efficient gene silencing by adenine base editor-mediated start codon mutation. Mol. Ther. 28, 431-440
    Whiddon, J. L., Langford, A. T., Wong, C. J., Zhong, J. W. & Tapscott, S. J., 2017. Conservation and innovation in the DUX4-family gene network. Nat. Genet. 49, 935-940
    Wood, K., Tellier, M. & Murphy, S., 2018. DOT1L and H3K79 methylation in transcription and genomic stability. Biomolecules. 8
    Yan, L., Yang, M., Guo, H., Yang, L., Wu, J., Li, R., Liu, P., Lian, Y., Zheng, X. & Yan, J., et al., 2013. Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells. Nat. Struct. Mol. Biol. 20, 1131-1139
    Zeng, Y., Li, J., Li, G., Huang, S., Yu, W., Zhang, Y., Chen, D., Chen, J., Liu, J. & Huang, X., 2018. Correction of the marfan syndrome pathogenic FBN1 mutation by base editing in human cells and heterozygous embryos. Mol. Ther. 26, 2631-2637
    Zhang, M., Zhou, C., Wei, Y., Xu, C., Pan, H., Ying, W., Sun, Y., Sun, Y., Xiao, Q. & Yao, N., et al., 2019. Human cleaving embryos enable robust homozygotic nucleotide substitutions by base editors. Genome Biol. 20, 101
    Zuccaro, Michael V., et al., 2020. Allele-specific chromosome removal after Cas9 cleavage in human embryos. Cell. 183, 1650-1664.e15
    Zuo, E., Sun, Y., Wei, W., Yuan, T., Ying, W., Sun, H., Yuan, L., Steinmetz, L. M., Li, Y. & Yang, H., 2019. Cytosine base editor generates substantial off-target single-nucleotide variants in mouse embryos. Science. 364, 289-292
  • 加载中

Catalog

    通讯作者: 陈斌, bchen63@163.com
    • 1. 

      沈阳化工大学材料科学与工程学院 沈阳 110142

    1. 本站搜索
    2. 百度学术搜索
    3. 万方数据库搜索
    4. CNKI搜索

    Article Metrics

    Article views (713) PDF downloads (31) Cited by ()
    Proportional views
    Related

    /

    DownLoad:  Full-Size Img  PowerPoint
    Return
    Return