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Volume 51 Issue 2
Feb.  2024
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Article Contents

CGG repeat expansion in LOC642361/NUTM2B-AS1 typically presents as oculopharyngodistal myopathy

doi: 10.1016/j.jgg.2023.12.009
Funds:

from the Major Scientific Research Program for Middle-aged and Young Scientists of Fujian Province 2021ZQNZD003 (to W.-J.C.)

from the Joint Funds for the Innovation of Science and Technology of Fujian Province 2021Y9011 (to W.-J.C.), and 2020Y9016 (to Z.Q.W.)

from the National Key Research and Development Program of China grants 2022YFC2703900 (to W.-J.C.) and 2022YFC2703904 (to W.-J.C.)

and from Fujian Medical University Affiliated First Hospital Talent Recruitment Research Initiation grants YJRC4185 (to K.Y.)

from the Fujian Provincial Health Technology projects grants 2022ZD01002 (to W.-J.C.)

and from the Key Clinical Specialty Discipline Construction Program of Fujian (to N.W.).

from the Local Science and Technology Development Project guided by the central government grants 2020L3010 (to W.-J.C.)

We thank the patients for granting permission to publish this information. We thank the patients and their families for their help and participation in this study. We thank Dr. Linying Zhou and Dr. Yan Hu (Electron Microscopy Lab of Public Technology Service Center, Fujian Medical University) for kindly providing technical assistance with electron microscopy. We also thank Depeng Wang (Grandomics Biosciences, Beijing, China), Jingjing Li (Grandomics Biosciences, Beijing, China), Qian Yu (Berry Genomics Corporation, Beijing, China), and Ji Zhang (Berry Genomics Corporation, Beijing, China) for their technical assistance. This study has been supported by grants from the National Natural Science Foundation of China, including 82025012 (to W.-J.C.), U1905210 (to W.-J.C.), 82230039 (to N.W.), U2005201 (to N.W.), 81974193 (to Z.Q.W.), and 82001217 (to J.J.L)

  • Received Date: 2023-09-26
  • Accepted Date: 2023-12-25
  • Rev Recd Date: 2023-12-25
  • Available Online: 2025-06-07
  • Publish Date: 2023-12-29
  • CGG repeat expansions in LOC642361/NUTM2B-AS1 have recently been identified as a cause of oculopharyngeal myopathy with leukoencephalopathy. However, since only three patients from a single family were reported, it remains unknown whether their clinicopathological features are typical for CGG repeat expansions in LOC642361/NUTM2B-AS1. Here, using repeat-primed-polymerase chain reaction and long-read sequencing, we identify 12 individuals from 3 unrelated families with CGG repeat expansions in LOC642361/NUTM2B-AS1, typically presenting with oculopharyngodistal myopathy. The CGG repeat expansions range from 161 to 669 repeat units. Most of the patients present with ptosis, restricted eye movements, dysphagia, dysarthria, and diffuse limb muscle weakness. Only one patient shows T2-weighted hyperintensity in the cerebellar white matter surrounding the deep cerebellar nuclei on brain magnetic resonance imaging. Muscle biopsies from three patients show a myopathic pattern and rimmed vacuoles. Analyses of muscle biopsies suggest that CGG repeat expansions in LOC642361/NUTM2B-AS1 may deleteriously affect aggrephagic capacity, suggesting that RNA toxicity and mitochondrial dysfunction may contribute to pathogenesis. Our study thus expands the phenotypic spectrum for the CGG repeat expansion of LOC642361/NUTM2B-AS1 and indicates that this genetic variant typically manifests as oculopharyngodistal myopathy with chronic myopathic changes with rimmed vacuoles and filamentous intranuclear inclusions in muscle fibers.
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  • Abecasis, G.R., Cherny, S.S., Cookson, W.O., Cardon, L.R., 2002. Merlin-rapid analysis of dense genetic maps using sparse gene flow trees. Nat. Genet. 30, 97-101.
    Amato, A.A., Jackson, C.E., Ridings, L.W., Barohn, R.J., 1995. Childhood-onset oculopharyngodistal myopathy with chronic intestinal pseudo-obstruction. Muscle Nerve 18, 842-847.
    Barbe, L., Lanni, S., Lopez-Castel, A., Franck, S., Spits, C., Keymolen, K., Seneca, S., Tome, S., Miron, I., Letourneau, J., et al., 2017. CpG Methylation, a parent-of-origin effect for maternal-biased transmission of congenital myotonic dystrophy. Am. J. Hum. Genet. 100, 488-505.
    Benson, G., 1999. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27, 573-580.
    Boivin, M., Deng, J., Pfister, V., Grandgirard, E., Oulad-Abdelghani, M., Morlet, B., Ruffenach, F., Negroni, L., Koebel, P., Jacob, H., et al., 2021. Translation of GGC repeat expansions into a toxic polyglycine protein in NIID defines a novel class of human genetic disorders: The polyG diseases. Neuron 109, 1825-1835.
    Brais, B., Bouchard, J.P., Xie, Y.G., Rochefort, D.L., Chretien, N., Tome, F.M., Lafreniere, R.G., Rommens, J.M., Uyama, E., Nohira, O., et al., 1998. Short GCG expansions in the PABP2 gene cause oculopharyngeal muscular dystrophy. Nat. Genet. 18, 164-167.
    Brook, J.D., McCurrach, M.E., Harley, H.G., Buckler, A.J., Church, D., Aburatani, H., Hunter, K., Stanton, V.P., Thirion, J.P., Hudson, T., et al., 1992. Molecular basis of myotonic dystrophy: expansion of a trinucleotide (CTG) repeat at the 3' end of a transcript encoding a protein kinase family member. Cell 68, 799-808.
    Consortium., G.M.o.H.s.D.G.-H., E.a., Consortium., G.M.o.H.s.D.G.-H., 2019. CAG repeat not polyglutamine length determines timing of huntington's disease onset. Cell 178, 887-900.
    Deng, J., Yu, J., Li, P., Luan, X., Cao, L., Zhao, J., Yu, M., Zhang, W., Lv, H., Xie, Z., et al., 2020. Expansion of GGC Repeat in GIPC1 is associated with oculopharyngodistal myopathy. Am. J. Hum. Genet. 106, 793-804.
    Durmus, H., Laval, S.H., Deymeer, F., Parman, Y., Kiyan, E., Gokyigiti, M., Ertekin, C., Ercan, I., Solakoglu, S., Karcagi, V., et al., 2011. Oculopharyngodistal myopathy is a distinct entity: clinical and genetic features of 47 patients. Neurology 76, 227-235.
    Fan, Y., Shen, S., Yang, J., Yao, D., Li, M., Mao, C., Wang, Y., Hao, X., Ma, D., Li, J., et al., 2022. GIPC1 CGG repeat expansion is associated with movement disorders. Ann. Neurol. 91, 704-715.
    Fischer, D., Kley, R.A., Strach, K., Meyer, C., Sommer, T., Eger, K., Rolfs, A., Meyer, W., Pou, A., Pradas, J., et al., 2008. Distinct muscle imaging patterns in myofibrillar myopathies. Neurology 71, 758-765.
    Gu, X., Yu, J., Jiao, K., Deng, J., Xia, X., Qiao, K., Yue, D., Gao, M., Zhao, C., Dong, J., et al., 2023. Non-coding CGG repeat expansion in LOC642361/NUTM2B-AS1 is associated with a phenotype of oculopharyngodistal myopathy. J. Med. Genet. jmg-2023-109345.
    Hagerman, R.J., Leehey, M., Heinrichs, W., Tassone, F., Wilson, R., Hills, J., Grigsby, J., Gage, B., Hagerman, P.J., 2001. Intention tremor, parkinsonism, and generalized brain atrophy in male carriers of fragile X. Neurology 57, 127-130.
    He, J., Liu, X.X., Ma, M.M., Lin, J.J., Fu, J., Chen, Y.K., Xu, G.R., Xu, L.Q., Fu, Z.F., Xu, D., et al., 2022. Heterozygous seryl-tRNA synthetase 1 variants cause Charcot-Marie-Tooth disease. Ann. Neurol. 93, 244-256.
    Ishiura, H., Shibata, S., Yoshimura, J., Suzuki, Y., Qu, W., Doi, K., Almansour, M.A., Kikuchi, J.K., Taira, M., Mitsui, J., et al., 2019. Noncoding CGG repeat expansions in neuronal intranuclear inclusion disease, oculopharyngodistal myopathy and an overlapping disease. Nat. Genet. 51, 1222-1232.
    Kaufman, K.K., Heckert, E.W., 1954. Dystrophia myotonica with associated sprue-like symptoms. Am. J. Med. 16, 614-616.
    Kent, W.J., 2002. BLAT--the BLAST-like alignment tool. Genome Res. 12, 656-664.
    Kremer, E.J., Pritchard, M., Lynch, M., Yu, S., Holman, K., Baker, E., Warren, S.T., Schlessinger, D., Sutherland, G.R., Richards, R.I., 1991. Mapping of DNA instability at the fragile X to a trinucleotide repeat sequence p(CCG)n. Science 252, 1711-1714.
    Kume, K., Kurashige, T., Muguruma, K., Morino, H., Tada, Y., Kikumoto, M., Miyamoto, T., Akutsu, S.N., Matsuda, Y., Matsuura, S., et al., 2023. CGG repeat expansion in LRP12 in amyotrophic lateral sclerosis. Am. J. Hum. Genet. 110, 1086-1097.
    Kumutpongpanich, T., Ogasawara, M., Ozaki, A., Ishiura, H., Tsuji, S., Minami, N., Hayashi, S., Noguchi, S., Iida, A., Nishino, I., et al., 2021. Clinicopathologic features of oculopharyngodistal myopathy with LRP12 CGG repeat expansions compared with other oculopharyngodistal myopathy subtypes. JAMA Neurol. 78, 853-863.
    Li, H., 2016. Minimap and miniasm: fast mapping and de novo assembly for noisy long sequences. Bioinformatics 32, 2103-2110.
    Li, H., 2018. Minimap2: pairwise alignment for nucleotide sequences. Bioinformatics 34, 3094-3100.
    Li, L.C., Dahiya, R., 2002. MethPrimer: designing primers for methylation PCRs. Bioinformatics 18, 1427-1431.
    Liu, Y., Lu, J., Li, K., Zhao, H., Feng, Y., Zhang, Z., Hu, L., Li, G., Shao, Y., Wang, Y., 2019. A multimodal imaging features of the brain in adult-onset neuronal intranuclear inclusion disease. Neurol. Sci. 40, 1495-1497.
    Magoc, T., Salzberg, S.L., 2011. FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics 27, 2957-2963.
    Mignarri, A., Carluccio, M.A., Malandrini, A., Sicurelli, F., Galli, L., Mazzei, M.A., Federico, A., Orrico, A., Dotti, M.T., 2012. The first Italian patient with oculopharyngodistal myopathy: case report and considerations on differential diagnosis. Neuromuscul. Disord. 22, 759-762.
    Nakano, Y., Takahashi-Fujigasaki, J., Sengoku, R., Kanemaru, K., Arai, T., Kanda, T., Murayama, S., 2017. PML nuclear bodies are altered in adult-onset neuronal intranuclear hyaline inclusion disease. J. Neuropathol. Exp. Neurol. 76, 585-594.
    Ogasawara, M., Iida, A., Kumutpongpanich, T., Ozaki, A., Oya, Y., Konishi, H., Nakamura, A., Abe, R., Takai, H., Hanajima, R., et al., 2020. CGG expansion in NOTCH2NLC is associated with oculopharyngodistal myopathy with neurological manifestations. Acta Neuropathol. Commun. 8, 204.
    Pan, Y., Xue, J., Chen, J., Zhang, X., Tu, T., Xiao, Q., Huang, W., Liu, Q., Zhu, L., Li, J., et al., 2022. Assessment of GGC repeat expansion in GIPC1 in patients with Parkinson's disease. Mov. Disord. 37, 1557-1559.
    Paulson, H., 2018. Repeat expansion diseases. Handb. Clin. Neurol. 147, 105-123.
    Quinlan, A.R., Hall, I.M., 2010. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26, 841-842.
    Rang, F.J., Kloosterman, W.P., de Ridder, J., 2018. From squiggle to basepair: computational approaches for improving nanopore sequencing read accuracy. Genome. Biol. 19, 90.
    Ross-Inta, C., Omanska-Klusek, A., Wong, S., Barrow, C., Garcia-Arocena, D., Iwahashi, C., Berry-Kravis, E., Hagerman, R.J., Hagerman, P.J., Giulivi, C., 2010. Evidence of mitochondrial dysfunction in fragile X-associated tremor/ataxia syndrome. Biochem. J. 429, 545-552.
    Sellier, C., Buijsen, R.A.M., He, F., Natla, S., Jung, L., Tropel, P., Gaucherot, A., Jacobs, H., Meziane, H., Vincent, A., et al., 2017. Translation of expanded CGG repeats into FMR polyG is pathogenic and may contribute to fragile X Tremor Ataxia Syndrome. Neuron 93, 331-347.
    Sone, J., Mori, K., Inagaki, T., Katsumata, R., Takagi, S., Yokoi, S., Araki, K., Kato, T., Nakamura, T., Koike, H., et al., 2016. Clinicopathological features of adult-onset neuronal intranuclear inclusion disease. Brain 139, 3170-3186.
    Sugiyama, A., Sato, N., Kimura, Y., Maekawa, T., Enokizono, M., Saito, Y., Takahashi, Y., Matsuda, H., Kuwabara, S., 2017. MR imaging features of the cerebellum in adult-onset neuronal intranuclear inclusion disease: 8 cases. AJNR. Am. J. Neuroradiol. 38, 2100-2104.
    Sun, Q.Y., Xu, Q., Tian, Y., Hu, Z.M., Qin, L.X., Yang, J.X., Huang, W., Xue, J., Li, J.C., Zeng, S., et al., 2020. Expansion of GGC repeat in the human-specific NOTCH2NLC gene is associated with essential tremor. Brain 143, 222-233.
    Tian, Y., Wang, J.L., Huang, W., Zeng, S., Jiao, B., Liu, Z., Chen, Z., Li, Y., Wang, Y., Min, H.X., et al., 2019. Expansion of human-specific GGC repeat in neuronal intranuclear inclusion disease-related disorders. Am. J. Hum. Genet. 105, 166-176.
    Todd, P.K., Oh, S.Y., Krans, A., He, F., Sellier, C., Frazer, M., Renoux, A.J., Chen, K.C., Scaglione, K.M., Basrur, V., et al., 2013. CGG repeat-associated translation mediates neurodegeneration in fragile X tremor ataxia syndrome. Neuron 78, 440-455.
    Tokimura, R., Hashimoto Maeda, M., Mitsutake, A., Sakai, S., Suzuki, F., Sugasawa, K., Fujimoto, C., Ishiura, H., Toda, T., 2022. Isolated paravermal hyperintensities in neuronal intranuclear inclusion disease. Neurology 98, 938-939.
    Travers, K.J., Chin, C.S., Rank, D.R., Eid, J.S., Turner, S.W., 2010. A flexible and efficient template format for circular consensus sequencing and SNP detection. Nucleic Acids Res. 38, e159.
    van Dellen, A., Blakemore, C., Deacon, R., York, D., Hannan, A.J., 2000. Delaying the onset of Huntington's in mice. Nature 404, 721-722.
    van der Sluijs, B.M., ter Laak, H.J., Scheffer, H., van der Maarel, S.M., van Engelen, B.G., 2004. Autosomal recessive oculopharyngodistal myopathy: a distinct phenotypical, histological, and genetic entity. J. Neurol. Neurosurg. Psychiatry 75, 1499-1501.
    Verkerk, A.J., Pieretti, M., Sutcliffe, J.S., Fu, Y.H., Kuhl, D.P., Pizzuti, A., Reiner, O., Richards, S., Victoria, M.F., Zhang, F.P., et al., 1991. Identification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndrome. Cell 65, 905-914.
    Wang, Z., Qiu, L., Lin, M., Chen, L., Zheng, F., Lin, L., Lin, F., Ye, Z., Lin, X., He, J., et al., 2022. Prevalence and disease progression of genetically-confirmed facioscapulohumeral muscular dystrophy type 1 (FSHD1) in China between 2001 and 2020: a nationwide population-based study. Lancet Reg. Health West. Pac. 18, 100323.
    Xi, J., Wang, X., Yue, D., Dou, T., Wu, Q., Lu, J., Liu, Y., Yu, W., Qiao, K., Lin, J., et al., 2020. 5' UTR CGG repeat expansion in GIPC1 is associated with oculopharyngodistal myopathy. Brain 144, 601-614.
    Yang, K., Zeng, Y.H., Qiu, Y.S., Lin, F., Chen, H.Z., Jin, M., Chen, L., Zheng, F.Z., Ding, Y.L., Cao, C.Y., et al., 2022. Expanding the phenotype and genotype spectra of PLIN4-associated myopathy with rimmed ubiquitin-positive autophagic vacuolation. Acta Neuropathol. 143, 733-735.
    Yao, X.P., Cheng, X., Wang, C., Zhao, M., Guo, X.X., Su, H.Z., Lai, L.L., Zou, X.H., Chen, X.J., Zhao, Y., et al., 2018. Biallelic mutations in MYORG cause autosomal recessive primary familial brain calcification. Neuron 98, 1116-1123.
    Yu, J., Deng, J., Guo, X., Shan, J., Luan, X., Cao, L., Zhao, J., Yu, M., Zhang, W., Lv, H., et al., 2021. The GGC repeat expansion in NOTCH2NLC is associated with oculopharyngodistal myopathy type 3. Brain 144, 1819-1832.
    Yu, J., Liufu, T., Zheng, Y., Xu, J., Meng, L., Zhang, W., Yuan, Y., Hong, D., Charlet-Berguerand, N., Wang, Z., et al., 2022a. CGG repeat expansion in NOTCH2NLC causes mitochondrial dysfunction and progressive neurodegeneration in Drosophila model. Proc. Natl. Acad. Sci. U. S. A. 119, e2208649119.
    Yu, J., Shan, J., Yu, M., Di, L., Xie, Z., Zhang, W., Lv, H., Meng, L., Zheng, Y., Zhao, Y., et al., 2022b. The CGG repeat expansion in RILPL1 is associated with oculopharyngodistal myopathy type 4. Am. J. Hum. Genet. 109, 533-541.
    Zeng, Y.H., Yang, K., Du, G.Q., Chen, Y.K., Cao, C.Y., Qiu, Y.S., He, J., Lv, H.D., Qu, Q.Q., Chen, J.N., et al., 2022. GGC repeat expansion of RILPL1 is associated with oculopharyngodistal myopathy. Ann. Neurol. 92, 512-526.
    Zhong, S., Lian, Y., Luo, W., Luo, R., Wu, X., Ji, J., Ji, Y., Ding, J., Wang, X., 2021. Upstream open reading frame with NOTCH2NLC GGC expansion generates polyglycine aggregates and disrupts nucleocytoplasmic transport: implications for polyglycine diseases. Acta Neuropathol. 142, 1003-1023.
    Zhou, Z.D., Jankovic, J., Ashizawa, T., Tan, E.K., 2022. Neurodegenerative diseases associated with non-coding CGG tandem repeat expansions. Nat. Rev. Neurol. 18, 145-157.
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