Bencivenga, S., Colombo, L., and Masiero, S., 2011. Cross talk between the sporophyte and the megagametophyte during ovule development. Sex. Plant Reprod. 24, 113-121.
|
Bourque, S., Jeandroz, S., Grandperret, V., Lehotai, N., Aime, S., Soltis, D.E., Miles, N.W., Melkonian, M., Deyholos, M.K., Leebens-Mack, J.H., et al., 2016. The evolution of HD2 proteins in green plants. Trends Plant Sci. 21, 1008-1016.
|
Brambilla, V., Battaglia, R., Colombo, M., Masiero, S., Bencivenga, S., Kater, M.M., and Colombo, L., 2007. Genetic and molecular interactions between BELL1 and MADS box factors support ovule development in Arabidopsis. Plant Cell 19, 2544-2556.
|
Broadhvest, J., Baker, S.C., and Gasser, C.S., 2000. SHORT INTEGUMENTS 2 pro motes growth during Arabidopsis reproductive development. Genetics 155, 899-907.
|
Chandrasekhara, C., Mohannath, G., Blevins, T., Pontvianne, F., and Pikaard, C.S., 2016. Chromosome-specific NOR inactivation explains selective rRNA gene silencing and dosage control in Arabidopsis. Genes Dev. 30, 177-190.
|
Chen, Z.J., Comai, L., and Pikaard, C.S., 1998. Gene dosage and stochastic effects de termine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids. Proc. Nat. Acad. Sci. U S A 95, 14891.
|
Chen, X., Lu, L., Qian, S., Scalf, M., Smith, L. M., & Zhong, X., 2018. Canonical and noncanonical actions of Arabidopsis histone deacetylases in ribosomal RNA processing. Plant Cell 30, 134-152.
|
Chantha, S.C., Gray-Mitsumune, M., Houde, J., and Matton, D.P., 2010. The MIDASIN and NOTCHLESS genes are essential for female gametophyte development in Arabidopsis thaliana. Physiol. Mol. Biol. Plants 16, 3-18.
|
Chevalier, D., Batoux, M., Fulton, L., Pfister, K., Yadav, R.K., Schellenberg, M., and Schneitz, K., 2005. STRUBBELIG defines a receptor kinase-mediated signaling pathway regulating organ development in Arabidopsis. Proc Nat Acad Sci U S A 102, 9074-9079.
|
Chevalier, E., Loubert-Hudon, A., Zimmerman, E.L., and Matton, D.P., 2011. Cell-cell communication and signaling pathways within the ovule:from its inception to fertilization. New Phytol. 192, 13-28.
|
Colville, A., Alhattab, R., Hu, M., Labbe, H., Xing, T., and Miki, B., 2011. Role of HD2 genes in seed germination and early seedling growth in Arabidopsis. Plant Cell Rep. 30, 1969-1979.
|
Durut, N., Abou-Ellail, M., Pontvianne, F., Das, S., Kojima, H., Ukai, S., de Bures, A., Comella, P., Nidelet, S., Rialle, S., et al., 2014. A duplicated NUCLEOLIN gene with antagonistic activity is required for chromatin organization of silent 45S rDNA in Arabidopsis. Plant Cell 26, 1330-1344.
|
Feng, C., Cai, X.W., Su, Y.N., Li, L., Chen, S., He, X.J., 2021. Arabidopsis RPD3-like histone deacetylases form multiple complexes involved in stress response. J. Genet. Genomics doi.org/10.1016/j.jgg.2021.04.004.
|
Ferretti M.B., and Karbstein K., 2019. Does functional specialization of ribosomes really exist? RNA 25, 521-538.
|
Fu Y., Li M., Zhang S., et al., 2020. Analyses of functional conservation and divergence reveal requirement of bHLH010/089/091 for pollen development at elevated temperature in Arabidopsis. J Genet Genomics 47, 477-492.
|
Han, Z., Yu, H., Zhao, Z., Hunter, D., Luo, X., Duan, J., and Tian, L., 2016. AtHD2D gene plays a role in plant growth, development, and response to abiotic stresses in Arabidopsis thaliana. Front. Plant Sci. 7, 310.
|
Hao, L., Wei, X., Zhu, J., Shi, J., Liu, J., Gu, H., Tsuge, T., and Qu, L.J., 2017. SNAIL1 is essential for female gametogenesis in Arabidopsis thaliana. J. Integr. Plant Biol. 59, 629-641.
|
Hill, T.A., Broadhvest, J., Kuzoff, R.K., and Gasser, C.S., 2006. Arabidopsis SHORT INTEGUMENTS 2 is a mitochondrial DAR GTPase. Genetics 174, 707-718.
|
Huang, C.K., Huang, L.F., Huang, J.J., Wu, S.J., Yeh, C.H., and Lu, C.A., 2010. A DEAD-box protein, AtRH36, is essential for female gametophyte development and is involved in rRNA biogenesis in Arabidopsis. Plant Cell Physiol. 51, 694-706.
|
Huang, X., Run, M., Sun, M.X., 2019. OsGCD1, a novel player in rice intine construction. J. Genet. Genomics 46, 359-362.
|
Imai, A., Komura, M., Kawano, E., Kuwashiro, Y., and Takahashi, T., 2008. A semi-dominant mutation in the ribosomal protein L10 gene suppresses the dwarf phenotype of the acl5 mutant in Arabidopsis thaliana. Plant J. 56, 881-890.
|
Jia, P.F., Xue, Y., Li, H.J., and Yang, W.C., 2018. Golgi-localized LOT regulates trans-Golgi network biogenesis and pollen tube growth. Proc. Nat. Acad. Sci. U S A 115, 12307-12312
|
Klepikova, A.V., Kasianov, A.S., Gerasimov, E.S., Logacheva, M.D., and Penin, A.A., 2016. A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA-seq profiling. Plant J. 88, 1058-1070.
|
Kutashev, K.O., Franek, M., Diamanti, K., Komorowski, J., Olsinova, M., and Dvorackova, M., 2021. Nucleolar rDNA folds into condensed foci with a specific combination of epigenetic marks. Plant J. 105, 1534-1548.
|
Lawrence, R.J., Earley, K., Pontes, O., Silva, M., Chen, Z.J., Neves, N., Viegas, W., and Pikaard, C.S., 2004. A concerted DNA methylation/histone methylation switch regulates rRNA gene dosage control and nucleolar dominance. Mol. Cell 13, 599-609.
|
Lewis, M.S., and Pikaard, C.S., 2001. Restricted chromosomal silencing in nucleolar dominance. Proc. Nat. Acad. Sci. U S A 98, 14536-14540.
|
Li, H.J., and Yang, W.C., 2020. Central cell in flowering plants:specification, signaling, and evolution. Frontiers Plant Sci. 11, 590307.
|
Li, H., Torres-Garcia, J., Latrasse, D., Benhamed, M., Schilderink, S., Zhou, W., KulI kova, O., Hirt, H., and Bisseling, T., 2017. Plant-specific histone deacetylases HDT1/2 regulate GIBBERELLIN 2-OXIDASE2 expression to control Arabidopsis root meristem cell number. Plant Cell 29, 2183.
|
Li, H., and Yang, W., 2016. RLKs orchestrate the signaling in plant male-female interaction. Sci. China Life Sci. 59, 867-877.
|
Li, H.J., Liu, N.Y., Shi, D.Q., Liu, J., and Yang, W.C., 2010. YAO is a nucleolar WD40-repeat protein critical for embryogenesis and gametogenesis in Arabidopsis. BMC Plant Biol. 10, 169.
|
Li, H.J., Meng, J.G., and Yang, W.C., 2018. Multilayered signaling pathways for pollen tube growth and guidance. Plant Reprod. 31, 31-41.
|
Li, H.J., Zhu, S.S., Zhang, M.X., Wang, T., Liang, L., Xue, Y., Shi, D.Q., Liu, J., and Yang, W.C., 2015. Arabidopsis CBP1 is a novel regulator of transcription initiation in central cell-mediated pollen tube guidance. Plant Cell 27, 2880-2893.
|
Li, N., Yuan, L., Liu, N., Shi, D., Li, X., Tang, Z., Liu, J., Sundaresan, V., and Yang, W.C., 2009. SLOW WALKER2, a NOC1/MAK21 homologue, is essential for coordinated cell cycle progression during female gametophyte development in Arabidopsis. Plant Physiol. 151, 1486-1497.
|
Lieber, D., Lora, J., Schrempp, S., Lenhard, M., and Laux, T., 2011. Arabidopsis WIH1 and WIH2 genes act in the transition from somatic to reproductive cell fate. Curr. Biol. 21, 1009-1017.
|
Liu, M., Shi, D.Q., Yuan, L., Liu, J., and Yang, W.C., 2010. SLOW WALKER3, encoding a putative DEAD-box RNA helicase, is essential for female gametogenesis in Arabidopsis. J. Integr. Plant Biol. 52, 817-828.
|
Luo, M., Wang, Y.Y., Liu, X., Yang, S., Lu, Q., Cui, Y., and Wu, K., 2012. HD2C interacts with HDA6 and is involved in ABA and salt stress response in Arabidopsis. J. Exp. Bot. 63, 3297-3306.
|
Lusser, A., Brosch, G., Loidl, A., Haas, H., and Loidl, P., 1997. Identification of maize histone deacetylase HD2 as an acidic nucleolar phosphoprotein. Science 277, 88-91.
|
Matsumura, Y., Ohbayashi, I., Takahashi, H., Kojima, S., Ishibashi, N., Keta, S., Nakagawa, A., Hayashi, R., Saez-Vasquez, J., Echeverria, M., et al., 2016. A genetic link between epigenetic repressor AS1-AS2 and a putative small subunit processome in leaf polarity establishment of Arabidopsis. Biol. Open 5, 942 -954.
|
McAbee, J.M., Hill, T.A., Skinner, D.J., Izhaki, A., Hauser, B.A., Meister, R.J., Venugopala Reddy, G., Meyerowitz, E.M., Bowman, J.L., and Gasser, C.S., 2006. ABERRANT TESTA SHAPE encodes a KANADI family member, linking polarity determination to separation and growth of Arabidopsis ovule integuments. Plant J. 46, 522-531.
|
McConnell, J.R., and Barton, M.K., 1998. Leaf polarity and meristem formation in Arabidopsis. Development 125, 2935-2942.
|
Missbach, S., Weis, B.L., Martin, R., Simm, S., Bohnsack, M.T., and Schleiff, E., 2013. 40S ribosome biogenesis co-factors are essential for gametophyte and embryo development. PLoS One 8, e54084.
|
Olmedo-Monfil, V., Duran-Figueroa, N., Arteaga-Vazquez, M., Demesa-Arevalo, E., Autran, D., Grimanelli, D., Slotkin, R.K., Martienssen, R.A., and Vielle-Calzada, J.P., 2010. Control of female gamete formation by a small RNA pathway in Arabidopsis. Nature 464, 628-632.
|
Pandey, R., Muller, A., Napoli, C.A., Selinger, D.A., Pikaard, C.S., Richards, E.J., Bender, J., Mount, D.W., and Jorgensen, R.A., 2002. Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res. 30, 5036-5055.
|
Park, J., Lim, C.J., Shen, M., Park, H.J., Cha, J.Y., Iniesto, E., Rubio, V., Mengiste, T., Zhu, J.K., Bressan, R.A., et al., 2018. Epigenetic switch from repressive to permissive chromatin in response to cold stress. Proc. Nat. Acad. Sci. U S A 115, E5400-E5409.
|
Pillitteri, L.J., Bemis, S.M., Shpak, E.D., and Torii, K.U., 2007. Haploinsufficiency after successive loss of signaling reveals a role for ERECTA-family genes in Arabidopsis ovule development. Development 134, 3099-3109.
|
Pontvianne, F., Abou-Ellail, M., Douet, J., Comella, P., Matia, I., Chandrasekhara, C., Debures, A., Blevins, T., Cooke, R., Medina, F.J., et al., 2010. Nucleolin is required for DNA methylation state and the expression of rRNA gene variants in Arabidopsis thaliana. PLoS Genet. 6, e1001225.
|
Portereiko, M.F., Sandaklie-Nikolova, L., Lloyd, A., Dever, C.A., Otsuga, D., and Drews, G.N., 2006. NUCLEAR FUSION DEFECTIVE1 encodes the Arabidopsis RPL21M protein and is required for karyogamy during female gametophyte development and fertilization. Plant Physiol. 141, 957-965.
|
Ray, A., Robinson-Beers, K., Ray, S., Baker, S.C., Lang, J.D., Preuss, D., Milligan, S.B., and Gasser, C.S., 1994. Arabidopsis floral homeotic gene BELL (BEL1) controls ovule development through negative regulation of AGAMOUS gene (AG). Proc. Nat. Acad. Sci. U S A 91, 5761-5765.
|
Robinson-Beers, K., Pruitt, R.E., and Gasser, C.S., 1992. Ovule development in wild-type Arabidopsis and two female-sterile mutants. Plant Cell 4, 1237-1249.
|
Saez-Vasquez, J., and Delseny, M., 2019. Ribosome biogenesis in plants:from functional 45S ribosomal DNA organization to ribosome assembly factors. Plant Cell 31, 1945-1967.
|
Schmidt, A., Wuest, S.E., Vijverberg, K., Baroux, C., Kleen, D., and Grossniklaus, U., 2011. Transcriptome analysis of the Arabidopsis megaspore mother cell uncovers the importance of RNA helicases for plant germline development. PLoS Biol. 9, e1001155.
|
Shi, D.Q., and Yang, W.C., 2011. Ovule development in Arabidopsis:progress and challenge. Curr. Opin. Plant Biol. 14, 74-80.
|
Shi, D.Q., Liu, J., Xiang, Y.H., Ye, D., Sundaresan, V., and Yang, W.C., 2005. SLOW WALKER1, essential for gametogenesis in Arabidopsis, encodes a WD40 protein involved in 18S ribosomal RNA biogenesis. Plant Cell 17, 2340-2354.
|
Wang H., Liu Y., Bruffett K., Lee J., Hause G., Walker J.C., Zhang S., 2008. Haplo-insufficiency of MPK3 in MPK6 mutant background uncovers a novel function of these two MAPKs in Arabidopsis ovule development. Plant Cell 20, 602-613.
|
Wang, J.G., Feng, C., Liu, H.H., Ge, F.R., Li, S., Li, H.J., and Zhang, Y., 2016. HAPLESS13-mediated trafficking of STRUBBELIG is critical for ovule development in Arabidopsis. PLoS Genet. 12, e1006269.
|
Weijers, D., Franke-van Dijk, M., Vencken, R.J., Quint, A., Hooykaas, P., and Offringa, R., 2001. An Arabidopsis Minute-like phenotype caused by a semi-dominant mutation in a RIBOSOMAL PROTEIN S5 gene. Development 128, 4289-4299.
|
Weis, B.L., Kovacevic, J., Missbach, S., and Schleiff, E., 2015. Plant-specific features of ribosome biogenesis. Trends Plant Sci. 20, 729-740.
|
Xiong, F., Duan, C.Y., Liu, H.H., Wu, J.H., Zhang, Z.H., Li, S., and Zhang, Y., 2020. Arabidopsis KETCH1 is critical for the nuclear accumulation of ribosomal proteins and gametogenesis. Plant Cell 32, 1270-1284.
|
Yang, W.C., Shi, D.Q., and Chen, Y.H., 2010. Female gametophyte development in flowering plants. Annu. Rev. Plant Biol. 61, 89-108.
|
Zhang, M.X., Zhu, S.S., Xu, Y.C., Guo, Y.L., Yang, W.C., and Li, H.J., 2020. Transcriptional repression specifies the central cell for double fertilization. Proc. Nat. Acad. Sci. U S A 117, 6231-6236.
|
Zhang, Y., Yin, B., Zhang, J., Cheng, Z., Liu, Y., Wang, B., Guo, X., Liu, X., Liu, D., Li, H., et al., 2019. Histone deacetylase HDT1 is involved in stem vascular development in Arabidopsis. Int. J. Mol. Sci. 20, 3452.
|
Zhao, T., Zhan, Z., Jiang, D., 2019. Histone modifications and their regulatory roles in plant development and environmental memory. J. Genet. Genomics 46, 467-476.
|
Zsogon, A., Szakonyi, D., Shi, X., and Byrne, M.E., 2014. Ribosomal protein RPL27a promotes female gametophyte development in a dose-dependent manner. Plant Physiol. 165, 1133-1143.
|