[1] |
Birney, E., Stamatoyannopoulos, J.A., Dutta, A. et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Nature, 447 (2007),pp. 799-816
|
[2] |
Dinger, M.E., Amaral, P.P., Mercer, T.R. et al. Pervasive transcription of the eukaryotic genome: functional indices and conceptual implications Brief Funct. Genomic Proteomic, 8 (2009),pp. 407-423
|
[3] |
Fejes-Toth, K., Sotirova, V., Sachidanandam, R. et al. Post-transcriptional processing generates a diversity of 59-modified long and short RNAs Nature, 457 (2009),pp. 1028-1032
|
[4] |
Guttman, M., Amit, I., Garber, M. et al. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals Nature, 458 (2009),pp. 223-227
|
[5] |
Hardiman, K.E., Brewster, R., Khan, S.M. et al. Genetics, 161 (2002),pp. 231-247
|
[6] |
Johnson, R. Long non-coding RNAs in Huntington's disease neurodegeneration Neurobiol. Dis., 46 (2012),pp. 245-254
|
[7] |
Kapranov, P., Cheng, J., Dike, S. et al. RNA maps reveal new RNA classes and a possible function for pervasive transcription Science, 316 (2007),pp. 1484-1488
|
[8] |
Knauss, J.L., Sun, T. Regulatory mechanisms of long noncoding RNAs in vertebrate central nervous system development and function Neuroscience, 235 (2013),pp. 200-214
|
[9] |
Kong, L., Zhang, Y., Ye, Z.Q. et al. CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine Nucleic Acids Res., 35 (2007),pp. W345-W349
|
[10] |
Lakhotia, S.C., Mallik, M., Singh, A.K. et al. Chromosoma, 121 (2012),pp. 49-70
|
[11] |
Li, M., Wen, S., Guo, X. et al. Nucleic Acids Res., 40 (2012),pp. 11714-11727
|
[12] |
Mohammad, F., Pandey, R.R., Nagano, T. et al. Kcnq1ot1/Lit1 noncoding RNA mediates transcriptional silencing by targeting to the perinucleolar region Mol. Cell. Biol., 28 (2008),pp. 3713-3728
|
[13] |
Nam, J.W., Bartel, D.P. Genome Res., 22 (2012),pp. 2529-2540
|
[14] |
Ng, S.Y., Lin, L., Soh, B.S. et al. Long noncoding RNAs in development and disease of the central nervous system Trends Genet., 29 (2013),pp. 461-468
|
[15] |
Ørom, U.A., Derrien, T., Beringer, M. et al. Long noncoding RNAs with enhancer-like function in human cells Cell, 143 (2010),pp. 46-58
|
[16] |
Ravasi, T., Suzuki, H., Pang, K.C. et al. Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome Genome Res., 16 (2006),pp. 11-19
|
[17] |
Soshnev, A.A., Ishimoto, H., McAllister, B.F. et al. Genetics, 189 (2011),pp. 455-468
|
[18] |
Willingham, A.T., Orth, A.P., Batalov, S. et al. A strategy for probing the function of noncoding RNAs finds a repressor of NFAT Science, 309 (2005),pp. 1570-1573
|
[19] |
Young, R.S., Marques, A.C., Tibbit, C. et al. Genome Biol. Evol., 4 (2012),pp. 427-442
|