[1] |
Alam, M., Mayerhofer, A., Schmidt, W.J. The neurobehavioral changes induced by bilateral rotenone lesion in medial forebrain bundle of rats are reversed by L-DOPA Behav. Brain Res., 151 (2004),pp. 117-124
|
[2] |
Augustin, M., Sedlmeier, R., Peters, T. et al. Efficient and fast targeted production of murine models based on ENU mutagenesis Mamm. Genome, 16 (2005),pp. 405-413
|
[3] |
Boch, J., Scholze, H., Schornack, S. et al. Breaking the code of DNA binding specificity of TAL-type III effectors Science, 326 (2009),pp. 1509-1512
|
[4] |
Bogdanove, A.J., Schornack, S., Lahaye, T. TAL effectors: finding plant genes for disease and defense Curr. Opin. Plant Biol., 13 (2010),pp. 394-401
|
[5] |
Bogdanove, A.J., Voytas, D.F. TAL effectors: customizable proteins for DNA targeting Science, 333 (2011),pp. 1843-1846
|
[6] |
Buehr, M., Meek, S., Blair, K. et al. Capture of authentic embryonic stem cells from rat blastocysts Cell, 135 (2008),pp. 1287-1298
|
[7] |
Cermak, T., Doyle, E.L., Christian, M. et al. Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting Nucleic Acids Res., 39 (2011),p. e82
|
[8] |
Christian, M., Cermak, T., Doyle, E.L. et al. Targeting DNA double-strand breaks with TAL effector nucleases Genetics, 186 (2010),pp. 757-761
|
[9] |
Chu, X., Zhang, Z., Yabut, J. et al. Characterization of multidrug resistance 1a/P-glycoprotein knockout rats generated by zinc finger nucleases Mol. Pharmacol., 81 (2012),pp. 220-227
|
[10] |
Cordes, S.P. Microbiol. Mol. Biol. Rev., 69 (2005),pp. 426-439
|
[11] |
Cui, X., Ji, D., Fisher, D.A. et al. Targeted integration in rat and mouse embryos with zinc-finger nucleases Nat. Biotechnol., 29 (2011),pp. 64-67
|
[12] |
Ding, S., Wu, X., Li, G. et al. Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice Cell, 122 (2005),pp. 473-483
|
[13] |
Evans, M.J., Kaufman, M.H. Establishment in culture of pluripotential cells from mouse embryos Nature, 292 (1981),pp. 154-156
|
[14] |
Feng, Q., Moran, J.V., , Boeke, J.D. Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition Cell, 87 (1996),pp. 905-916
|
[15] |
Geurts, A.M., Cost, G.J., Freyvert, Y. et al. Science, 325 (2009),p. 433
|
[16] |
Geurts, A.M., Cost, G.J., Remy, S. et al. Generation of gene-specific mutated rats using zinc-finger nucleases Methods Mol. Biol., 597 (2010),pp. 211-225
|
[17] |
Geurts, A.M., Moreno, C. Zinc-finger nucleases: new strategies to target the rat genome Clin. Sci. (Lond.), 119 (2010),pp. 303-311
|
[18] |
Gong, S., Yang, X.W., Li, C. et al. Highly efficient modification of bacterial artificial chromosomes (BACs) using novel shuttle vectors containing the R6Kγ origin of replication Genome Res., 12 (2002),pp. 1992-1998
|
[19] |
Goto, Y., Peachey, N.S., Ripps, H. et al. Functional abnormalities in transgenic mice expressing a mutant rhodopsin gene Invest. Ophthalmol. Vis. Sci., 36 (1995),pp. 62-71
|
[20] |
Hammer, R.E., Maika, S.D., Richardson, J.A. et al. Spontaneous inflammatory disease in transgenic rats expressing HLA-B27 and human beta 2m: an animal model of HLA-B27-associated human disorders Cell, 63 (1990),pp. 1099-1112
|
[21] |
Hockemeyer, D., Wang, H., Kiani, S. et al. Genetic engineering of human pluripotent cells using TALE nucleases Nat. Biotechnol., 29 (2011),pp. 731-734
|
[22] |
Hodgson, J.G., Agopyan, N., Gutekunst, C.A. et al. A YAC mouse model for Huntington's disease with full-length mutant huntingtin, cytoplasmic toxicity, and selective striatal neurodegeneration Neuron, 23 (1999),pp. 181-192
|
[23] |
Homberg, J.R., Mul, J.D., de Wit, E. et al. Complete knockout of the nociceptin/orphanin FQ receptor in the rat does not induce compensatory changes in μ, δ and κ opioid receptors Neuroscience, 163 (2009),pp. 308-315
|
[24] |
Homberg, J.R., Olivier, J.D., Smits, B.M. et al. Characterization of the serotonin transporter knockout rat: a selective change in the functioning of the serotonergic system Neuroscience, 146 (2007),pp. 1662-1676
|
[25] |
Hong, J., He, H., Weiss, M.L. Derivation and characterization of embryonic stem cells lines derived from transgenic Fischer 344 and Dark Agouti rats Stem Cells Dev (2011)
|
[26] |
Huang, G., Ashton, C., Kumbhani, D.S. et al. Genetic manipulations in the rat: progress and prospects Curr. Opin. Nephrol. Hypertens., 20 (2011),pp. 391-399
|
[27] |
Huang, G., Tong, C., Kumbhani, D.S. et al. Beyond knockout rats: new insights into finer genome manipulation in rats Cell Cycle, 10 (2011),pp. 1059-1066
|
[28] |
Huang, P., Xiao, A., Zhou, M. et al. Heritable gene targeting in zebrafish using customized TALENs Nat. Biotechnol., 29 (2011),pp. 699-700
|
[29] |
Ivics, Z., Izsvak, Z., Chapman, K.M. et al. Sleeping Beauty transposon mutagenesis of the rat genome in spermatogonial stem cells Methods, 53 (2011),pp. 356-365
|
[30] |
Ivics, Z., Izsvak, Z., Medrano, G. et al. Sleeping Beauty transposon mutagenesis in rat spermatogonial stem cells Nat. Protoc., 6 (2011),pp. 1521-1535
|
[31] |
Izsvák, Z., Frohlich, J., Grabundzija, I. et al. Generating knockout rats by transposon mutagenesis in spermatogonial stem cells Nat. Methods, 7 (2010),pp. 443-445
|
[32] |
Jacob, H.J., Lazar, J., Dwinell, M.R. et al. Gene targeting in the rat: advances and opportunities Trends Genet., 26 (2010),pp. 510-518
|
[33] |
Kaufman, C.D., Izsvak, Z., Katzer, A. et al. Frog Prince transposon-based RNAi vectors mediate efficient gene knockdown in human cells J. RNAi Gene Silencing, 1 (2005),pp. 97-104
|
[34] |
Kawamata, M., Ochiya, T. Generation of genetically modified rats from embryonic stem cells Proc. Natl. Acad. Sci. USA, 107 (2010),pp. 14223-14228
|
[35] |
Kitada, K., Keng, V.W., Takeda, J. et al. Generating mutant rats using the Sleeping Beauty transposon system Methods, 49 (2009),pp. 236-242
|
[36] |
Kuo, Y.M., Li, Z., Jiao, Y. et al. Extensive enteric nervous system abnormalities in mice transgenic for artificial chromosomes containing Parkinson disease-associated α-synuclein gene mutations precede central nervous system changes Hum. Mol. Genet., 19 (2010),pp. 1633-1650
|
[37] |
Li, P., Tong, C., Mehrian-Shai, R. et al. Germline competent embryonic stem cells derived from rat blastocysts Cell, 135 (2008),pp. 1299-1310
|
[38] |
Li, Y., Liu, W., Oo, T.F. et al. Mutant LRRK2(R1441G) BAC transgenic mice recapitulate cardinal features of Parkinson's disease Nat. Neurosci., 12 (2009),pp. 826-828
|
[39] |
Li, T., Huang, S., Jiang, W.Z. et al. Nucleic Acids Res., 39 (2011),pp. 359-372
|
[40] |
Li, T., Huang, S., Zhao, X. et al. Modularly assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes Nucleic Acids Res., 39 (2011),pp. 6315-6325
|
[41] |
Lieber, M.R. The mechanism of human nonhomologous DNA end joining J. Biol. Chem., 283 (2008),pp. 1-5
|
[42] |
Lindsey, J.R.
|
[43] |
Liu, G., Geurts, A.M., Yae, K. et al. Target-site preferences of Sleeping Beauty transposons J. Mol. Biol., 346 (2005),pp. 161-173
|
[44] |
Liu, L., Orozco, I.J., Planel, E. et al. A transgenic rat that develops Alzheimer's disease-like amyloid pathology, deficits in synaptic plasticity and cognitive impairment Neurobiol. Dis., 31 (2008),pp. 46-57
|
[45] |
Liu, J., Li, C., Yu, Z. et al. J. Genet. Genomics, 5 (2012),pp. 209-215
|
[46] |
Lo Bianco, C., Schneider, B.L., Bauer, M. et al. Lentiviral vector delivery of parkin prevents dopaminergic degeneration in an α-synuclein rat model of Parkinson's disease Proc. Natl. Acad. Sci. USA, 101 (2004),pp. 17510-17515
|
[47] |
Machida, S., Kondo, M., Jamison, J.A. et al. P23H rhodopsin transgenic rat: correlation of retinal function with histopathology Invest. Ophthalmol. Vis. Sci., 41 (2000),pp. 3200-3209
|
[48] |
Mahfouz, M.M., Li, L., Shamimuzzaman, M. et al. Proc. Natl. Acad. Sci. USA, 108 (2011),pp. 2623-2628
|
[49] |
Martin, G.R. Isolation of a pluripotent cell line from early mouse embryos cultured in medium conditioned by teratocarcinoma stem cells Proc. Natl. Acad. Sci. USA, 78 (1981),pp. 7634-7638
|
[50] |
Mashimo, T., Takizawa, A., Voigt, B. et al. Generation of knockout rats with X-linked severe combined immunodeficiency (X-SCID) using zinc-finger nucleases PLoS ONE, 5 (2010),p. e8870
|
[51] |
Mátés, L., Chuah, M.K., Belay, E. et al. Molecular evolution of a novel hyperactive Sleeping Beauty transposase enables robust stable gene transfer in vertebrates Nat. Genet., 41 (2009),pp. 753-761
|
[52] |
Mathias, S.L., Scott, A.F., , Boeke, J.D. et al. Reverse transcriptase encoded by a human transposable element Science, 254 (1991),pp. 1808-1810
|
[53] |
Ménoret, S., Iscache, A.L., Tesson, L. et al. Characterization of immunoglobulin heavy chain knockout rats Eur. J. Immunol., 40 (2010),pp. 2932-2941
|
[54] |
Miller, J.C., Tan, S., Qiao, G. et al. A TALE nuclease architecture for efficient genome editing Nat. Biotechnol., 29 (2011),pp. 143-148
|
[55] |
Morbitzer, R., Elsaesser, J., Hausner, J. et al. Assembly of custom TALE-type DNA binding domains by modular cloning Nucleic Acids Res., 39 (2011),pp. 5790-5799
|
[56] |
Moreno, C., Hoffman, M., Stodola, T.J. et al. Creation and characterization of a renin knockout rat Hypertension, 57 (2011),pp. 614-619
|
[57] |
Moscou, M.J., Bogdanove, A.J. A simple cipher governs DNA recognition by TAL effectors Science, 326 (2009),p. 1501
|
[58] |
Mussolino, C., Morbitzer, R., Lutge, F. et al. A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity Nucleic Acids Res., 39 (2011),pp. 9283-9293
|
[59] |
Pavletich, N.P., Pabo, C.O. Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A Science, 252 (1991),pp. 809-817
|
[60] |
Philipeaux, J.M. Note sur l'extirpation des capsules surrenales chez les rats albinos C. R. Acad. Sci. (Paris), 43 (1856),p. 904
|
[61] |
Porteus, M.H., Carroll, D. Gene targeting using zinc finger nucleases Nat. Biotechnol., 23 (2005),pp. 967-973
|
[62] |
Reyon, D., Tsai, S.Q., Khayter, C. et al. FLASH assembly of TALENs for high-throughput genome editing Nat. Biotechnol, 30 (2012),pp. 460-465
|
[63] |
Sander, J.D., Cade, L., Khayter, C. et al. Targeted gene disruption in somatic zebrafish cells using engineered TALENs Nat. Biotechnol., 29 (2011),pp. 697-698
|
[64] |
Scholze, H., Boch, J. TAL effectors are remote controls for gene activation Curr. Opin. Microbiol., 14 (2011),pp. 47-53
|
[65] |
Shizuya, H., Birren, B., Kim, U.J. et al. Proc. Natl. Acad. Sci. USA, 89 (1992),pp. 8794-8797
|
[66] |
Smits, B.M., Mudde, J.B., van de Belt, J. et al. Generation of gene knockouts and mutant models in the laboratory rat by ENU-driven target-selected mutagenesis Pharmacogenet. Genomics, 16 (2006),pp. 159-169
|
[67] |
Takeda, J., Keng, V.W., Horie, K. Germline mutagenesis mediated by Sleeping Beauty transposon system in mice Genome Biol., 8 (2007),p. S14
|
[68] |
Tesson, L., Usal, C., Menoret, S. et al. Knockout rats generated by embryo microinjection of TALENs Nat. Biotechnol., 29 (2011),pp. 695-696
|
[69] |
Tong, C., Huang, G., Ashton, C. et al. Generating gene knockout rats by homologous recombination in embryonic stem cells Nat. Protoc., 6 (2011),pp. 827-844
|
[70] |
Tong, C., Li, P., Wu, N.L. et al. Nature, 467 (2010),pp. 211-213
|
[71] |
Ueda, S., Kawamata, M., Teratani, T. et al. Establishment of rat embryonic stem cells and making of chimera rats PLoS ONE, 3 (2008),p. e2800
|
[72] |
Urnov, F.D., Rebar, E.J., Holmes, M.C. et al. Genome editing with engineered zinc finger nucleases Nat. Rev. Genet., 11 (2010),pp. 636-646
|
[73] |
van Boxtel, R., Gould, M.N., Cuppen, E. et al. ENU mutagenesis to generate genetically modified rat models Methods Mol. Biol., 597 (2010),pp. 151-167
|
[74] |
Vasireddy, V., Chavali, V.R., Joseph, V.T. et al. Rescue of photoreceptor degeneration by curcumin in transgenic rats with P23H rhodopsin mutation PLoS ONE, 6 (2011),p. e21193
|
[75] |
von Hörsten, S., Schmitt, I., Nguyen, H.P. et al. Transgenic rat model of Huntington's disease Hum. Mol. Genet., 12 (2003),pp. 617-624
|
[76] |
Wheeler, V.C., Auerbach, W., White, J.K. et al. Length-dependent gametic CAG repeat instability in the Huntington's disease knock-in mouse Hum. Mol. Genet., 8 (1999),pp. 115-122
|
[77] |
Woltjen, K., Michael, I.P., Mohseni, P. et al. piggyBac transposition reprograms fibroblasts to induced pluripotent stem cells Nature, 458 (2009),pp. 766-770
|
[78] |
Wood, A.J., Lo, T.W., Zeitler, B. et al. Targeted genome editing across species using ZFNs and TALENs Science, 333 (2011),p. 307
|
[79] |
Xu, Q., Shenoy, S., Li, C. Mouse models for LRRK2 Parkinson's disease. Parkinsonism Relat. Disord., 18 (2012),pp. S186-S189
|
[80] |
Yamada, M., Iwatsubo, T., Mizuno, Y. et al. Overexpression of α-synuclein in rat substantia nigra results in loss of dopaminergic neurons, phosphorylation of alpha-synuclein and activation of caspase-9: resemblance to pathogenetic changes in Parkinson's disease J. Neurochem., 91 (2004),pp. 451-461
|
[81] |
Yamamoto, S., Nakata, M., Sasada, R. et al. Derivation of rat embryonic stem cells and generation of protease-activated receptor-2 knockout rats Transgenic Res (2011)
|
[82] |
Yang, X.W., Model, P., Heintz, N. Nat. Biotechnol., 15 (1997),pp. 859-865
|
[83] |
Ying, Q.L., Wray, J., Nichols, J. et al. The ground state of embryonic stem cell self-renewal Nature, 453 (2008),pp. 519-523
|
[84] |
Zan, Y., Haag, J.D., Chen, K.S. et al. Production of knockout rats using ENU mutagenesis and a yeast-based screening assay Nat. Biotechnol., 21 (2003),pp. 645-651
|
[85] |
Zhang, F., Cong, L., Lodato, S. et al. Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription Nat. Biotechnol., 29 (2011),pp. 149-153
|
[86] |
Zhao, X., Lv, Z., Liu, L. et al. Derivation of embryonic stem cells from Brown Norway rats blastocysts J. Genet. Genomics, 37 (2010),pp. 467-473
|