Analysis of QTLs for yield-related traits in Yuanjiang common wild rice (Oryza rufipogon Griff.)

Qiang Fu; Peijiang Zhang; Lubin Tan; Zuofeng Zhu; Dan Ma; Yongcai Fu; Xinchun Zhan; Hongwei Cai; Chuanqing Sun

doi:10.1016/S1673-8527(09)60033-3

Volume 37 Issue 2

Feb. 2010

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Article Navigation > Journal of Genetics and Genomics > 2010 > 37(2): 147-157

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Analysis of QTLs for yield-related traits in Yuanjiang common wild rice (Oryza rufipogon Griff.)

doi: 10.1016/S1673-8527(09)60033-3

a
State Key Laboratory of Plant Physiology and Biochemistry, National Center for Evaluation of Agricultural Wild Plants (Rice), Laboratory of Crop Heterosis and Utilization of Ministry of Education, Beijing Key Laboratory of Crop Genetic Improvement, Key Laboratory of Crop Genetic Improvement and Genome of Ministry of Agriculture, Department of Plant Genetics and Breeding, China Agricultural University, Beijing 100193, China
b
Institute of Rice Research, Anhui Academy of Agricultural Sciences, Hefei 230031, China

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Corresponding author: E-mail address: suncq@cau.edu.cn (Chuanqing Sun)
Received Date: 2009-08-28
Accepted Date: 2010-01-20
Rev Recd Date: 2010-01-04

Available Online: 2010-03-18

Publish Date: 2010-02-20

Abstract

Abstract

Using an accession of common wild rice (Oryza rufipogon Griff.) collected from Yuanjiang County, Yunnan Province, China, as the donor and an elite cultivar 93-11, widely used in two-line indica hybrid rice production in China, as the recurrent parent, an advanced backcross populations were developed. Through genotyping of 187 SSR markers and investigation of six yield-related traits of two generations (BC₄F₂ and BC₄F₄), a total of 26 QTLs were detected by employing single point analysis and interval mapping in both generations. Of the 26 QTLs, the alleles of 10 (38.5%) QTLs originating from O. rufipogon had shown a beneficial effect for yield-related traits in the 93-11 genetic background. In addition, five QTLs controlling yield and its components were newly identified, indicating that there are potentially novel alleles in Yuanjiang common wild rice. Three regions underling significant QTLs for several yield-related traits were detected on chromosome 1, 7 and 12. The QTL clusters were founded and corresponding agronomic traits of those QTLs showed highly significant correlation, suggesting the pleiotropism or tight linkage. Fine-mapping and cloning of these yield-related QTLs from wild rice would be helpful to elucidating molecular mechanism of rice domestication and rice breeding in the future.
- common wild rice,
- yield-related traits,
- advanced backcross population,
- QTL

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References(47)

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