Viral receptor profiles of masked palm civet revealed by single-cell transcriptomics

Peiwen Ding; Haoyu Wang; Jiacheng Zhu; Fuyu An; Jinqian Xu; Xiangning Ding; Lihua Luo; Weiying Wu; Qiuyu Qin; Yanan Wei; Wandong Zhao; Zhiyuan Lv; Haimeng Li; Yixin Zhu; Meiling Li; Wensheng Zhang; Yanan Zhang; Zhihua Ou; Huan Liu; Yan Hua

doi:10.1016/j.jgg.2022.04.009

Volume 49 Issue 11

Nov. 2022

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Article Navigation > Journal of Genetics and Genomics > 2022 > 49(11): 1072-1075

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Viral receptor profiles of masked palm civet revealed by single-cell transcriptomics

doi: 10.1016/j.jgg.2022.04.009

Peiwen Ding^1,2,
Haoyu Wang^1,2,
Jiacheng Zhu^1,2,
Fuyu An³,
Jinqian Xu³,
Xiangning Ding^4,5,
Lihua Luo^4,5,
Weiying Wu⁶,
Qiuyu Qin^7,8,
Yanan Wei^7,8,
Wandong Zhao^7,8,
Zhiyuan Lv^7,8,
Haimeng Li^9,10,
Yixin Zhu^9,10,
Meiling Li¹¹,
Wensheng Zhang¹²,
Yanan Zhang¹³,
Zhihua Ou^15,16,
Huan Liu¹⁷,
Yan Hua¹⁸

1. College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China;
2. BGI-Shenzhen, Shenzhen, Guangdong 518083, China;
3. Guangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, Guangdong Academy of Forestry, Guangzhou, Guangdong 510520, China;
4. College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China;
5. BGI-Shenzhen, Shenzhen, Guangdong 518083, China;
6. Department of Neurobiology, NHC and CAMS Key Laboratory of Medical Neurobiology, School of Brain Science and Brian Medicine, and the MOE Frontier Science Center for Brain Research and Brain–Machine Integration, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310012, China;
7. BGI-Shenzhen, Shenzhen, Guangdong 518083, China;
8. School of Basic Medicine, Qingdao University, Qingdao, Shandong 266071, China;
9. College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China;
10. BGI-Shenzhen, Shenzhen, Guangdong 518083, China;
11. BGI-Shenzhen, Shenzhen, Guangdong 518083, China;
12. School of Basic Medical Sciences, Binzhou Medical University, Yantai, Shandong 264003, China;
13. Tsinghua-Berkeley Shenzhen Institute, Tsinghua University, Shenzhen, Guangdong 518000, China;
15. BGI-Shenzhen, Shenzhen, Guangdong 518083, China;
16. Shenzhen Key Laboratory of Unknown Pathogen Identification, BGI-Shenzhen, Shenzhen, Guangdong 518083, China;
17. BGI-Shenzhen, Shenzhen, Guangdong 518083, China;
18. Guangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, Guangdong Academy of Forestry, Guangzhou, Guangdong 510520, China

Funds:

This work was supported by China National GeneBank (CNGB).

Received Date: 2021-12-21
Accepted Date: 2022-04-11
Rev Recd Date: 2022-03-31
Publish Date: 2022-04-29

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References

Cantuti-Castelvetri, L., Ojha, R., Pedro, L.D., Djannatian, M., Franz, J., Kuivanen, S., van der Meer, F., Kallio, K., Kaya, T., Anastasina, M., et al., 2020. Neuropilin-1 facilitates SARS-CoV-2 cell entry and infectivity. Science 370, 856-860

Chen, D., Sun, J., Zhu, J., Ding, X., Lan, T., Wang, X., Wu, W., Ou, Z., Zhu, L., Ding, P., et al., 2021. Single cell atlas for 11 non-model mammals, reptiles and birds. Nat. Commun. 12, 1-17

Guan, Y., Zheng, B.J., He, Y.Q., Liu, X.L., Zhuang, Z.X., Cheung, C.L., Luo, S.W., Li, P.H., Zhang, L.J., Guan, Y.J., et al., 2003. Isolation and characterization of viruses related to the SARS coronavirus from animals in Southern China. Science 302, 276-278

He, W.-T., Hou, X., Zhao, J., Sun, J., He, H., Si, W., Wang, J., Jiang, Z., Yan, Z., Xing, G., et al., 2022. Virome characterization of game animals in China reveals a spectrum of emerging pathogens. Cell 185,1117-1129

Matsumoto, T., Ahmed, K., Wimalaratne, O., Nanayakkara, S., Perera, D., Karunanayake, D., Nishizono, A., 2011. Novel sylvatic rabies virus variant in endangered golden palm civet, Sri Lanka. Emerg. Infect. Dis. 17, 2346-2349

Mendenhall, I.H., Low, D., Neves, E.S., Anwar, A., Oh, S., Su, Y.C.F., Smith, G.J.D., 2016. Evidence of canine parvovirus transmission to a civet cat (Paradoxurus musangus) in Singapore. One Heal. 2, 122-125

Roberton, S.I., Bell, D.J., Smith, G.J.D., Nicholls, J.M., Chan, K.H., Nguyen, D.T., Tran, P.Q., Streicher, U., Poon, L.L.M., Chen, H., et al., 2006. Avian influenza H5N1 in viverrids: Implications for wildlife health and conservation. Proc. R. Soc. B Biol. Sci. 273, 1729-1732

Sabeta, C.T., Marston, D.A., McElhinney, L.M., Horton, D.L., Phahladira, B.M.N., Fooks, A.R., 2020. Rabies in the African civet: An incidental host for lyssaviruses? Viruses 12, 368

Techangamsuwan, S., Banlunara, W., Radtanakatikanon, A., Sommanustweechai, A., Siriaroonrat, B., Lombardini, E.D., Rungsipipat, A., 2015. Pathologic and Molecular Virologic Characterization of a Canine Distemper Outbreak in Farmed Civets. Vet. Pathol. 52, 724-731

Wang, S., Qiu, Z., Hou, Y., Deng, X., Xu, W., Zheng, T., Wu, P., Xie, S., Bian, W., Zhang, C., et al., 2021. AXL is a candidate receptor for SARS-CoV-2 that promotes infection of pulmonary and bronchial epithelial cells. Cell Res. 31, 126-140

Wu, F., Zhao, S., Yu, B., Chen, Y.M., Wang, W., Song, Z.G., Hu, Y., Tao, Z.W., Tian, J.H., Pei, Y.Y., et al., 2020. A new coronavirus associated with human respiratory disease in China. Nature 579, 265-269

Zhang, Z., Zhu, Z., Chen, W., Cai, Z., Xu, B., Tan, Zhiying, Wu, A., Ge, X., Guo, X., Tan, Zhongyang, et al., 2019. Cell membrane proteins with high N-glycosylation, high expression and multiple interaction partners are preferred by mammalian viruses as receptors. Bioinformatics 35, 723-728

Zhou, P., Yang, X. Lou, Wang, X.G., Hu, B., Zhang, L., Zhang, W., Si, H.R., Zhu, Y., Li, B., Huang, C.L., et al., 2020. A pneumonia outbreak associated with a new coronavirus of probable bat origin. Nature 579, 270-273

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