Identification of potential cross-protective epitope between a new type of coronavirus (2019-nCoV) and severe acute respiratory syndrome virus

Tianyi Qiu; Tiantian Mao; Yuan Wang; Mengdi Zhou; Jingxuan Qiu; Jianwei Wang; Jianqing Xu; Zhiwei Cao

doi:10.1016/j.jgg.2020.01.003

Volume 47 Issue 2

Feb. 2020

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Article Navigation > Journal of Genetics and Genomics > 2020 > 47(2): 115-117

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Identification of potential cross-protective epitope between a new type of coronavirus (2019-nCoV) and severe acute respiratory syndrome virus

doi: 10.1016/j.jgg.2020.01.003

1
Shanghai Public Health Clinical Center, Fudan University, Shanghai, 200433, China
2
Department of Gastroenterology, Shanghai 10th People's Hospital, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China
3
NHC Key Laboratory of Systems Biology of Pathogens and Christophe Mérieux Laboratory, IPB, CAMS-Fondation Mérieux, Institute of Pathogen Biology (IPB), Chinese Academy of Medical Science & Peking Union Medical College, Beijing, 100730, China
4
Shanghai Public Health Clinical Center, Fudan University, Shanghai, 200433, China
5
Department of Gastroenterology, Shanghai 10th People's Hospital, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China

More Information

Corresponding author: E-mail address: xujianqing@shphc.org.cn (Jianqing Xu); E-mail address: zwcao@tongji.edu.cn (Zhiwei Cao)
Publish Date: 2020-02-25

Abstract

These authors contributed equally to this work.

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References(16)

References

[1]	Hwang, W.C., Lin, Y., Santelli, E., Sui, J., Jaroszewski, L., Stec, B., Farzan, M., Marasco, W.A., Liddington, R.C., 2006. Structural basis of neutralization by a human anti-severe acute respiratory syndrome spike protein antibody, 80R. J Biol Chem 281, 34610-34616.
[2]	Kirchdoerfer, R.N., Cottrell, C.A., Wang, N., Pallesen, J., Yassine, H.M., Turner, H.L., Corbett, K.S., Graham, B.S., McLellan, J.S., Ward, A.B., 2016. Pre-fusion structure of a human coronavirus spike protein. Nature 531, 118-121.
[3]	Prabakaran, P., Gan, J., Feng, Y., Zhu, Z., Choudhry, V., Xiao, X., Ji, X., Dimitrov, D.S., 2006. Structure of severe acute respiratory syndrome coronavirus receptor-binding domain complexed with neutralizing antibody. J Biol Chem 281, 15829-15836.
[4]	Qiu, T., Yang, Y., Qiu, J., Huang, Y., Xu, T., Xiao, H., Wu, D., Zhang, Q., Zhou, C., Zhang, X., Tang, K., Xu, J., Cao, Z., 2018. CE-BLAST makes it possible to compute antigenic similarity for newly emerging pathogens. Nat Commun 9, 1772-1772.
[5]	Reguera, J., Santiago, C., Mudgal, G., Ordono, D., Enjuanes, L., Casasnovas, J.M., 2012. Structural bases of coronavirus attachment to host aminopeptidase N and its inhibition by neutralizing antibodies. PLoS Pathog 8, e1002859-e1002859.
[6]	Saminathan, M., Chakraborty, S., Tiwari, R., Dhama, K., Verma, A., 2014. Coronavirus infection in equines: a review. Asian J Anim Vet Adv 9, 164-176.
[7]	Schoeman, D., Fielding, B.C., 2019. Coronavirus envelope protein: current knowledge. Virol J 16, 69-69.
[8]	Shu, Y., McCauley, J., 2017. GISAID: Global initiative on sharing all influenza data - from vision to reality. Euro Surveill 22, 30494.
[9]	Van Regenmortel, M.H.V., 1996. Mapping epitope structure and activity: from one-dimensional prediction to four-dimensional description of antigenic specificity. Methods 9, 465-472.
[10]	WHO, 2020a. Novel Coronavirus-China., https://www.who.int/csr/don/12-january-2020-novel-coronavirus-china/en/.
[11]	WHO, 2020b. Pneumonia of unknown cause in China., https://www.who.int/csr/don/05-january-2020-pneumonia-of-unkown-cause-china/en/.
[12]	WHO, W.H.O., 2003. Summary of probable SARS cases with onset of illness from 1 November 2002 to 31 July 2003., http://www.who.int/csr/sars/country/table2004_04_21/en/index.html.
[13]	WHO, W.H.O., 2018. WHO MERS-CoV Global Summary and Assessment of Risk, August 2018 (WHO/MERS/RA/August18)., http://www.who.int/csr/disease/coronavirus_infections/riskassessment-august-2018.pdf?ua=1.
[14]	Xu, X., Chen, P., Wang, J., Feng, J., Zhou, H., Li, X., Zhong, W., Hao, P., 2020. Evolution of the novel coronavirus from the ongoing Wuhan outbreak and modeling of its spike protein for risk of human transmission. J Science China Life Sciences, 1-4. https://doi.org/10.1007/s11427-020-1637-5.
[15]	Zhang, Y.Z., 2020. Initial genome release of novel coronavirus. http://virological.org/t/initial-genome-release-of-novel-coronavirus/319?from=groupmessage.
[16]	Zhou, P., Yang, X., Wang, X., et al., et al, 2020. A pneumonia outbreak associated with a new coronavirus of probable bat origin Nature. DOI: 10.1038/s41586-020-2012-7.