5.9
CiteScore
5.9
Impact Factor
Volume 40 Issue 12
Dec.  2013
Turn off MathJax
Article Contents

QcReads: An Adapter and Quality Trimming Tool for Next-Generation Sequencing Reads

doi: 10.1016/j.jgg.2013.11.001
More Information
  • Corresponding author: E-mail address: zhangyp@mail.kiz.ac.cn (Ya-Ping Zhang)
  • Received Date: 2013-10-08
  • Accepted Date: 2013-11-01
  • Rev Recd Date: 2013-10-31
  • Available Online: 2013-11-09
  • Publish Date: 2013-12-20
  • These authors contributed equally to this work.
  • loading
  • [1]
    Feuillet, C., Leach, J.E., Rogers, J. et al. Crop genome sequencing: lessons and rationales Trends Plant Sci., 16 (2011),pp. 77-88
    [2]
    Jia, J., Zhao, S., Kong, X. et al. Nature, 496 (2013),pp. 91-95
    [3]
    Kong, Y. Btrim: a fast, lightweight adapter and quality trimming program for next-generation sequencing technologies Genomics, 98 (2011),pp. 152-153
    [4]
    Kwon, J.M., Goate, A.M. The candidate gene approach Alcohol Res. Health, 24 (2000),pp. 164-168
    [5]
    Lindgreen, S. AdapterRemoval: easy cleaning of next-generation sequencing reads BMC Res. Notes, 5 (2012),p. 337
    [6]
    Ling, H.Q., Zhao, S., Liu, D. et al. Nature, 496 (2013),pp. 87-90
    [7]
    Manske, M., Miotto, O., Campino, S. et al. Nature, 487 (2012),pp. 375-379
    [8]
    Martin, M. Cutadapt removes adapter sequences from high-throughput sequencing reads EMBnet. J., 17 (2011),pp. 10-12
    [9]
    Ning, Z., Cox, A.J., Mullikin, J.C. SSAHA: a fast search method for large DNA databases Genome Res., 11 (2001),pp. 1725-1729
    [10]
    Pflueger, D., Terry, S., Sboner, A. et al. Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing Genome Res., 21 (2011),pp. 56-67
    [11]
    Xu, L., Chen, S.Y., Nie, W.H. et al. J. Genet. Genomics, 39 (2012),pp. 131-137
    [12]
    Young, N.D., Jex, A.R., Li, B. et al. Nat. Genet., 44 (2012),pp. 221-225
  • 加载中

Catalog

    通讯作者: 陈斌, bchen63@163.com
    • 1. 

      沈阳化工大学材料科学与工程学院 沈阳 110142

    1. 本站搜索
    2. 百度学术搜索
    3. 万方数据库搜索
    4. CNKI搜索

    Article Metrics

    Article views (113) PDF downloads (1) Cited by ()
    Proportional views
    Related

    /

    DownLoad:  Full-Size Img  PowerPoint
    Return
    Return