5.9
CiteScore
5.9
Impact Factor
Volume 34 Issue 11
Nov.  2007
Turn off MathJax
Article Contents

Genetic Analysis of Six Endangered Local Duck Populations in China Based on Microsatellite Markers

doi: 10.1016/S1673-8527(07)60114-3
More Information
  • Corresponding author: E-mail address: ghchen@yzu.edu.cn (Guohong Chen)
  • Received Date: 2007-03-02
  • Accepted Date: 2007-03-26
  • Available Online: 2007-11-22
  • Publish Date: 2007-11-20
  • Seventeen microsatellite loci were used to assess the genetic variation and population structure of six endangered duck populations in China. PIC, heterozygosity with two estimators of genetic differentiation ( and ), and Nei's standard genetic distance were evaluated. The results showed that these six endangered duck populations showed high polymorphism. The proportion of inter-population subdivision among the six duck populations ranged between 17.0 and 14.7%. The average heterozygosity was 0.706, 0.702, 0.691, 0.676, 0.604, and 0.660 in the Gaoyou, Liancheng, Jinding, Beijing, Shaoxing, and Jianchang ducks, respectively. The averagePIC ranged from 0.561 to 0.663. Finally, the results showed higher genetic diversity and difference above the levels of genetic variation among all the populations.
  • loading
  • [1]
    Chen, YX, Chen, et al. Research for domestic duck resources and the strain breeding Journal of Xiamen University (Natural Science), 40 (2001),pp. 642-646
    [2]
    Su, Y, Liu, et al. studies on genetic variation of different Chinese duck populations with random amplified polymorphic DNA analysis Asian-Australia J Anim Sci, 19 (2006),pp. 475-481
    [3]
    Wang, GC, Dou, et al. The idea of development on future waterfowl in partly city of China China Poultry, 27 (2005),pp. 36-43
    [4]
    Chen, YX
    [5]
    Chen, GH, Wang, et al.
    [6]
    The Edit Committee of Report on Domestic Animal Genetic Resources
    [7]
    Wu, XS, Chen, et al. Analysis of genetic relationship among Chinese native chicken breeds using microsatellites marker Acta Genet Sin, 31 (2004),pp. 43-50
    [8]
    Pandey, AK, Dinesh, et al. Population structure and genetic bottleneck analysis of ankleshwar poultry breed by microsatellite markers Asian-Australia J Anim Sci, 18 (2005),pp. 915-921
    [9]
    Quan, YC, Sun, et al. Acta Genetica Sinica, 33 (2006),pp. 908-916
    [10]
    Chang, GB, Chang, et al. Study on genetic diversity of wild quail in China with microsatellite DNA markers Acta Genet Sin, 32 (2005),pp. 795-803
    [11]
    Maak, S, Wimmers, et al. Mol Ecol Notes, 3 (2003),pp. 224-227
    [12]
    Huang, YH, Tu, et al. Genet Sel Evol, 37 (2005),pp. 455-472
    [13]
    Paulus, KB, Tiedemann, et al. Molecular Ecology Notes, 3 (2003),pp. 250-252
    [14]
    Stai, SM, Hughes, et al. Anim Genet, 34 (2003),pp. 387-389
    [15]
    Williams, CL, Brust, et al. Conserv Genet, 6 (2005),pp. 445-453
    [16]
    Chen, HJ, Yue, et al. Analysis of genetic diversity of shandong indigenous chicken breeds using microsatellite marker Acta Genet Sin, 30 (2003),pp. 855-860
    [17]
    Gong, DQ, Zhang, et al. The genetic relationship analysis among 11 duck populations using microsatell ite markers Acta Veterinari aet Zootechnica Sinica, 36 (2005),pp. 1256-1260
    [18]
    Wang, LG, Yu, et al. Journal of Yangzhou University (Agricultural and life Science Edition), 27 (2006),pp. 72-76
    [19]
    Wu, Y, Hou, et al. Genetic relationships among six ducks populations using four microsatellite markers Acta Veterinaria et Zootechnica Sinica, 37 (2006),pp. 389-395
    [20]
    Su, Y, Chen, et al. Microsatellite analysis of genetic diversity and phylogenetic relationship of meat-type and dual-purpose duck breeds in China Anim Biotechnol Bull, 10 (2006),pp. 199-205
    [21]
    Goudet, J
    [22]
    Raymond, M, Rousset, et al. GENEPOP (Ver.1.2): population genetics software for exact tests and ecumenicism J Hered, 86 (1995),pp. 248-249
    [23]
    Nei, M Estimation of average heterozygosity and genetic distance from a small number of individuals Genetics, 89 (1978),pp. 583-590
    [24]
    Weir, BS, Cockerham, et al. Estimating F-statistics for the analysis of population structure Evolution, 38 (1984),pp. 1358-1370
    [25]
    Felsenstein, J
    [26]
    Nei, M Genetic distance between populations Amer Natur, 106 (1972),pp. 283-293
    [27]
    Saitou, N, Nei, et al. The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol, 4 (1987),pp. 406-425
    [28]
    Rendo, F, Iriondo, et al. Analysis of the genetic structure of endangered bovine breeds from the western pyrenees using DNA microsatellite markers Biochem Genet, 42 (2004),pp. 99-108
    [29]
    Maak, S, Wimmers, et al. Mol Ecol Notes, 3 (2003),pp. 224-227
    [30]
    Williams, LC, Homan, et al. Biochemical Genetics, 42 (2004),pp. 35-41
    [31]
    Tarr, C, Conant, et al. Mol Ecol, 7 (1998),pp. 719-731
    [32]
    Luikart, G, Cornuet, et al. Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data Conserv Biol, 12 (1998),pp. 228-237
  • 加载中

Catalog

    通讯作者: 陈斌, bchen63@163.com
    • 1. 

      沈阳化工大学材料科学与工程学院 沈阳 110142

    1. 本站搜索
    2. 百度学术搜索
    3. 万方数据库搜索
    4. CNKI搜索

    Article Metrics

    Article views (96) PDF downloads (0) Cited by ()
    Proportional views
    Related

    /

    DownLoad:  Full-Size Img  PowerPoint
    Return
    Return